pele
Python energy landscape explorer
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pele::HS_WCA_interaction Struct Reference

#include <hs_wca.h>

List of all members.

Public Member Functions

 HS_WCA_interaction (const double eps, const double sca, const Array< double > radii)
double energy (const double r2, const size_t atomi, const size_t atomj) const
double energy_gradient (const double r2, double *const gij, const size_t atomi, const size_t atomj) const
double energy_gradient_hessian (const double r2, double *const gij, double *const hij, const size_t atomi, const size_t atomj) const
double compute_energy (const double C6, const double C12, const double ir6, const double ir12) const
void evaluate_pair_potential (const double rmin, const double rmax, const size_t nr_points, const size_t atomi, const size_t atomj, std::vector< double > &x, std::vector< double > &y) const

Public Attributes

const double _eps
const double _sca
const double _infty
const double _prfac
const Array< double > _radii

Detailed Description

Fast pairwise interaction for Hard Sphere + Weeks-Chandler-Andersen (fHS_WCA) potential, refer to S. Martiniani CPGS pp 20 well depth _eps and scaling factor (shell thickness = sca * R, where R is the hard core radius), sca determines the thickness of the shell

Definition at line 191 of file hs_wca.h.


Constructor & Destructor Documentation

pele::HS_WCA_interaction::HS_WCA_interaction ( const double  eps,
const double  sca,
const Array< double >  radii 
) [inline]

Definition at line 198 of file hs_wca.h.


Member Function Documentation

double pele::HS_WCA_interaction::compute_energy ( const double  C6,
const double  C12,
const double  ir6,
const double  ir12 
) const [inline]

If r2 > r02 && r2 <= coff * coff, this computes the energy. Returning the maximum of 0 and the enrgy term makes the result strictly positive also in the regime close to zero where there can be numerical issues.

Definition at line 286 of file hs_wca.h.

double pele::HS_WCA_interaction::energy ( const double  r2,
const size_t  atomi,
const size_t  atomj 
) const [inline]

Definition at line 207 of file hs_wca.h.

double pele::HS_WCA_interaction::energy_gradient ( const double  r2,
double *const  gij,
const size_t  atomi,
const size_t  atomj 
) const [inline]

Definition at line 229 of file hs_wca.h.

double pele::HS_WCA_interaction::energy_gradient_hessian ( const double  r2,
double *const  gij,
double *const  hij,
const size_t  atomi,
const size_t  atomj 
) const [inline]

Definition at line 253 of file hs_wca.h.

void pele::HS_WCA_interaction::evaluate_pair_potential ( const double  rmin,
const double  rmax,
const size_t  nr_points,
const size_t  atomi,
const size_t  atomj,
std::vector< double > &  x,
std::vector< double > &  y 
) const [inline]

This can be used to plot the potential, as evaluated numerically.

Definition at line 294 of file hs_wca.h.


Member Data Documentation

Definition at line 192 of file hs_wca.h.

Definition at line 194 of file hs_wca.h.

Definition at line 195 of file hs_wca.h.

Definition at line 196 of file hs_wca.h.

Definition at line 193 of file hs_wca.h.


The documentation for this struct was generated from the following file:
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