pele.mindist.MeasurePolicy

class pele.mindist.MeasurePolicy[source]

interface for possible measurements on a set of coordinates

The MeasurePolicy defines an interface which defines how to perform certain measures which are essential for minpermdist on a set of coordinates. For more motivation of this class see TransformPolicy.

Methods

find_permutation(X1, X2) find the best permutation between 2 sets of coordinates
find_rotation(X1, X2) find the best rotation matrix to bring structure 2 on 1
get_com(X) calculate the center of mass
get_dist(X1, X2) calculate the distance between 2 set of coordinates

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pele.mindist.TransformPolicy.translate

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pele.mindist.MeasurePolicy.find_permutation